Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MFVNGGQLKKINQKWLIIGTGL------------------LLFMMMLPSIILLAKMTIGLVMVLVVAIAIKIASKTISNVLEDKQ-ADPNQLTSQTTQSRIINLAVGLVSIFTGGLSLLIIAKT--GIAVICAAVVTLAIYEYAKDYKYAEDKEIGKSINDKLDEIAKNTTNFIVSGIEKLVSPQEQQV------------------------------- |
| 3IF8 Chain:B ((339-590)) | LFKVRSDLDFAEQLWCKMSSSVISYQDLVKCFTLIIQSLQRGDIQPWLHSGSNSLLSKLIHQSYHGTMDTVSLSGTIPVQMLLEIGLDKLKKDYISFFIGQELASLNHLEYFIAPSVDIQEQVYRVQKLHHILEILVSCMPFIKSQHELLFSLTQICIKYYKQNPLDEQHIFQLPVRPTAVKNLYQSEKPQKWRVEIYSGQKKIKTVWQLSDSSPIDHLNFHRIFFTNMVTCSQVHF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89810 for 918 contacts (-97.8/contact) +
2D Compatibility (PS) -17778 + (NN) -8236 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -120424.0 ( -131.18 by residue)
QMean score : 0.268
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