Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSWARSSAILMLSTFAAGYQEEVLTLMEKEEEEFLSHEQVKALLEKIRGEVLKTPIWHNVMDPVDDFVGRVMN
2YH5 Chain:A ((88-120))
---------------------RSSLQFIDPKGHTLTQSQNDALVAVFQAAFSKLE------------------
General information:
TITO was launched using:
RESULT:
Template:
2YH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5472 for 130 contacts (-42.1/contact) +
2D Compatibility (PS) -3451 + (NN) -590 + (LL) 3080
1D Compatibility (HY) 0 + (ID) 250
Total energy: -6683.0 ( -51.41 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_2YH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YH5-query.scw
PDB file :
Tito_Scwrl_2YH5.pdb
: