Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------MLRLLCEIEYEVRGMENIPKYPFVIASKHQSPLETFIFILLFRNAV------FILKRELKWIPFIGL---HLMALRMIFINRSDGINAMRHIIKLARMRIAENRSIIIFPEGTRTAAKQKTKYQPGIAALYSVLSVPVLPVALNTGLFWPK---SILSMRRNPGKAVIEILPPIYHGLNKNEFLKNLEKTIEERSNKLTAEKN------------------------------------------------------------------------- |
| 4UPC Chain:A ((42-655)) | IPLNKTAPCVCQSSISGDTGVIHVVEKEEDLQWVLTDGPNPPYMVLLESKHFTRDLMEKLKGRTSRIAAVSLTKPSPASGFSPNGLAYEDFSFPIFLLEDENETKVINLSQNGSCAMQLFSHMTATCMRRSSIQSTFSIVCDPLSDYNVWSMLNVVVAATR-LDSRS-FFWNVAPGAESAVASFVTQLAAAEALQKAPDVTTLPRNVMFVFFQGETFDYIGSSRMVYDMEKGPVSQKNESVRL-------EKSGAGVPAVILRRPNQSQPLPP------RARNISGVVLADHSGAFHNKYYQSIYDTAENINVSYPEWLSPEEDLNFVTDTAKALADVATVLGRALYEDTVQADPQTVTLLYGFLIKPLQHYIAVVQYALANLTGTVVNLCVRSTARLARAWSSTEYSTWTESRWKDIRARIFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35716 for 1331 contacts (-26.8/contact) +
2D Compatibility (PS) -18489 + (NN) -3653 + (LL) 1484
1D Compatibility (HY) -1600 + (ID) 1550
Total energy: -59524.0 ( -44.72 by residue)
QMean score : 0.134
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