Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKEIKTKTKERMLKTIQSFYNDIKGIRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVTDNKTLLIKVWDIGVIGEVKNAILNANLNLNPVVEGNTIRIVLPDLTQETRERLVKLLHQFAENARVAIRNIRRDIMEEIERMQENKKISEDDFHNAKKEIQNITDDNIKKIDGELSIKEKDILNY
1GE9 Chain:A ((4-184))
ELEDIFKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEEIKVEYYGSKVPIKQLGTISVPEHNQIVIQVWDQNAVPAIEKAIRE-ELNLNPTVQGNVIRVTLPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE---GISEDEKKRALERLQKLTDKYIDEINKLMEAKEKEIMSV
General information:
TITO was launched using:
RESULT:
Template:
1GE9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83786 for 1281 contacts (-65.4/contact) +
2D Compatibility (PS) -19740 + (NN) -5361 + (LL) 232
1D Compatibility (HY) -15200 + (ID) 3600
Total energy: -127455.0 ( -99.50 by residue)
QMean score : 0.645
(partial model without unconserved sides chains):
PDB file :
Tito_1GE9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GE9-query.scw
PDB file :
Tito_Scwrl_1GE9.pdb
: