Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLSSIPFNANWLNQQYAEIIQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPSTETTEDNHVLGREQFNAHNTFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHHVLDNNPDAKVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLIDDIQFIQNKVQTQEEFFYTFNELHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEEKLDIPPEALNYIANQIQSNIRELEG--ALTRLLAYSQLLGKPITTELTAEALKDIIQAPKSKKITIQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHTTVIHAHEKISKDLKEDPIFKQEVENLEKEIRNV |
| 2HCB Chain:B ((3-317)) | -------------------------------------------------------------------------------------------------------------------LNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEA--KKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK-NVREIEGKIKLIKLKGFEGLERK-----------------ERKERDKLMQIVEFVANYYAVKVEDILSDK-NKRTSEARKIAMYLCRKVCSASLIEIARAFK--DHTTVIHAIRSVEEEKK--RKFKHLVGFLEKQ---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2HCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -103291 for 2317 contacts (-44.6/contact) +
2D Compatibility (PS) -32712 + (NN) -13227 + (LL) 11172
1D Compatibility (HY) -26400 + (ID) 5900
Total energy: -170358.0 ( -73.53 by residue)
QMean score : 0.529
|
|
|