Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSLKTVIGMNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKSETKPLTTPMTAKMDTTITPFQIIHSKNDHPEGTIATVSNVNKLTKPL-KNKEVKSVEHVRRDHNLMIPDLSSDFTLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDADDNIVLYAISKDRHDYVKLTTTTKNDHFLDALAA---VKKDMQPYTDIITN--KDTIDRTTHVFAPSKP--EKLKTYRMVFNTISVEKMNAILFDDSTIVRSSKSGVTTYNNNTGVANYNDKNEKYHYKNLSEDEASSSKMEETIPG-------TFD--FINGHGGFLNE------DFRLFSTNNQSGELTYQRFLNGYPTFNK--EGSNQIQVTWGEK-GVFDYRRSLLR--TDVVLNSEDNKTLPKLESVRSSLANNSDINFEKVTNIAIGYEMQDNSDHNHIEVQINSEL--VPRWYVEYD------GEWYVYNDGRLE------- |
4OPU Chain:A ((2-453)) | MKELKY-----------DVLIIGGGFAGSSAAYQLSRRGLKILLVDSK-----------------------PWNRI---GDKPCGDAVSKAHFDKLGMPYPKGEE---LENKINGIKLYSPDMQTVWTVNHEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSK--VVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYPSIHEYYKKYLDKYAPDVDKSKLLV-KGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDIFRRFLQKLSNDDINYGMKKKIIKEEDLLEA-SEKGDLHLSVADKAMRVISGLGRPSLLFKLKAVAESMKKIKELYLNYPRSPSSLGSWRREVDNVLTEFNKSLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10683 for 3377 contacts (3.2/contact) +
2D Compatibility (PS) -42100 + (NN) -6119 + (LL) 2228
1D Compatibility (HY) -5600 + (ID) 3450
Total energy: -44358.0 ( -13.14 by residue)
QMean score : 0.195
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