Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEEILREVADIFIGDDRDSIYDYKTGNELVRFFNHYFNKGDIYQAPFPSRWLYVVKHLQTLIQERKINQFFTLILSNHYIKYELKIDEVEAAKQAAKALKLFNKRLNHYGYYITGTNNARYFMDKDEDTESIGYGGYANIYLQKS--TG--LAVKKLKEEYLTDSSIKSRFKREFDLTKSFDTNPLFINVFEFNE--SDYSYTMELAD-ETLKDYIES-KTISELEKVKIIMKILKAMSQAHSENKIHRDISSKNVLMFR-GKVKISDLGLGKNLDEIHSHQTFDTNGVGQYKYCAPEQMYSLKQADKQSDVFSLGRLINFIMTGNVVNNHH-------------------------LFRGVSDKATNSSKEYRFEDANEMLKMLQRILEYHSSAKHVEKCQEKLKRGVFDDESEEFIMTRSDEQLCQMVLSSNNNEQACLIRYMQKNESSACDLIESINRKYQEFCGRFEDYDPFAKLAYMILCNNFSYRVNETAARVLNYVAWSVNRFSAQDLIKGLINRGVEPLIEEKLKDN |
| 3TKI Chain:A ((6-262)) | ---------------------------------------------------------------------------------------------------------------------------VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK---------NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARI-TIPDIKKD------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -33214 for 1646 contacts (-20.2/contact) +
2D Compatibility (PS) -22747 + (NN) -4708 + (LL) 21744
1D Compatibility (HY) -12800 + (ID) 2150
Total energy: -53875.0 ( -32.73 by residue)
QMean score : 0.400
|
|
|