Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQQLIEALKSKEDKMIEIRRYLHQHPELSFHEDETAKYIAEFYKGKDVEVET-NV--------------------GPRGIKVTIDSGKP-GKTLAIRADFDALPITED---TGLSFASQN-KGVMHACGH---DAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKA-MIENGVLDGVDHVLGVHVMSTMKTGNVYYRPGYVQTGRAFFKLKVQGKGGHGSSPHMANDAIVAGSYFVTALQTVVSRRL-----SP-F----ETGVVTIGSFDGKG-QFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLSKGLEDMY----GVTCTLEYN-DDYPAL--YNDPEFTEYVAKTLKEANLDFGVE-MCEPQPPSEDFAYYA-K-ERPSAFIYTGAAVEDGEIYPHHHPKFNISEKSLLISAEAVGTVVLDYLKGDN |
| 3PFO Chain:A ((14-431)) | -TQSLRAAVDRNFNDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADS-DGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARVHVQTVTEEESTGNGALSTLMR-G-Y-RADACLIPEPTG----HTLTR--A--QVGAVWFRLRVRGTPVHVAYSETGTSAILSAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKG-GDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLADAQATDSFLSENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAA---FNAPLDARLSTAVNDTRYYSVDYGIPALC--YGPYG-----QGPHAFDERIDLESLRKTTLSIALFVAEWCGLR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121710 for 3160 contacts (-38.5/contact) +
2D Compatibility (PS) -39941 + (NN) -21404 + (LL) 1156
1D Compatibility (HY) -6400 + (ID) 3150
Total energy: -191449.0 ( -60.59 by residue)
QMean score : 0.438
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