Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLKPKYQIVIA-GLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASP--GLFGVNAGAVFFVIFSITFIQIQSFKMIVVIAFLGAIVVTILVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGILIMNETDLQGLLFWLSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIMLISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIYIMKKGRQRL |
| 3PT5 Chain:A ((4-326)) | IISPDYYYVLTVAGQSNAMAYGEGLPLPDREDAPHPRIKQLARFAHTHP-----GGPSCHFNDIIPLTHCPHDVQDM---QSYHHPLATNHQTQYGTVGQALHIARKLLPFIP-DNAGILIVPCCRGGSAFTAGSEGTYSERHGASHDACRWGTDTPLYQDLVSRTRAALVKNPQNKFLGVCWMQGEFDLMTSDYASHPQHFNHMVEAFRRDLKQYHSQLNDAPWFCGDTTWYWKENF--PHAYEAIYGNYQNNILANIIFVDFQQQGARGLTNAPDEDPDDLSTGYYGSAYRSPENWTTAL--RSSHFSSAARRGIISDRFVEAILQFWRER- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -390854 for 2829 contacts (-138.2/contact) +
2D Compatibility (PS) -31759 + (NN) 635 + (LL) 2184
1D Compatibility (HY) 8800 + (ID) 2050
Total energy: -413044.0 ( -146.00 by residue)
QMean score : 0.175
|
|
|