Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MERVLITGGAGFIGSHLVDDL-QQDYDVYVLDNYRTGKRENIKSLADDHVFELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIKRFIFASS-AAVYGDLPDLPKSDQSL-ILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFF-----GDGLQTRDFVYVYDVVQSVRLIMEHKDAIGHGYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARKGDIKHSYADISNLKALGFVPKYTVETGLK---DYFNFEVDNIEEVTAKEVEMS |
2P5U Chain:B ((2-311)) | --RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVP--FFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG--VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGE-AGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSLEGI---YNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRGAV-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202445 for 2639 contacts (-76.7/contact) +
2D Compatibility (PS) -30959 + (NN) -2123 + (LL) 1376
1D Compatibility (HY) -14800 + (ID) 5650
Total energy: -254601.0 ( -96.48 by residue)
QMean score : 0.508
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