Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENQHNSKLLTLLLIGLAVFIQQSSVIAGVNVSIADFITLLILVYLLFFANHLLKANHFLQFFIILYTYRMIITLCLLFFDDLIFITVKEVLASTVKYAFVVIYFYLGMIIFKLGNSKKVIVTSYIISSVTIGLFCIIAGLNKSPLLMKLLYFDEIRSKGLMNDPNYFAMTQIITLVLAYKYIHNYIFKVLACGILLWSLTTTGSKTAFIILIVLAIYFFIKKLFSRNAVSVVSMLVIMLILLCFTFYNINYYLFQLSDLDAVPSLDRMASIFEEGFASLNDSGSERSVVWINAILVIKYTLGFGVGLVDYVHIGSQINGILLVAHNTYLQIFAEWGILFGALFIIFMLYLLFELFRFNISGKNVTAIVVMLTMLIYFLTVSFNNSRYVAFILGIIVFIVQYEKMERDRNEE |
| 2WUQ Chain:A ((3-316)) | --------NSESLLRELRDALHEGGLTGSFLVRD--------------LYTGEELGIDPDTELPTASLVKLPLALATLERIR----LGEVDGAQQIEVAPGRITTPGPTGLSRFRHPARVAVDDLLYLSTSVS--------------------DGTASDALFEITPPAQVEQMVREW--------------------------GFRDLTVRHSMREHRVPQLDVARANTGTARAFVDLLEALWAPVLTG--------------PALPPEPAARLRELMAANLLRHRL----APDFASDAATWSSKTGTL-----LNLRHEVGVVEH----------------------------------ADGQVFAVAVLTESQVPADSQPGAEALMAQVARRLRDRLREWHHHH------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -323908 for 2414 contacts (-134.2/contact) +
2D Compatibility (PS) -28191 + (NN) 8608 + (LL) 14052
1D Compatibility (HY) 12400 + (ID) 1450
Total energy: -318489.0 ( -131.93 by residue)
QMean score : 0.221
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