Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQ---------------AQYTELEKTLPQL----SAGSNMQDYNM-------KLYDATQNIADKYNVIITTNVGVFKPHAVR------------------------------DMNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQ-DHMNQNTHMNQQPQIQQGHMQSSNHQMMSPKA---NMHSSNHQMNQSNKKVLPAAGESMTSSIL---TASIAALLLVSGLFL---AFRRRSTNK------ |
| 1L9V Chain:A ((1-313)) | MAELACFCYPHLENDSYKFIPFNNLAIKAMLTAKVDKKDMDKFYDSIIYGIAPPPQFKKRYNTNDNSRGMNFETIMFTKVAMLICEALNSLKVTQANVSNVLSRVVSIRHLENLVIRKENPQDILFHSKDLLLKSTLIAIGQSKEIETTITAEGGEIVFQNAAFTMWKLTYLEHQLMPILDQNFIEYKVTLNEDKPISDVHVKELVAELRWQYNKFAVITHGKGHYRIVKYSSVANHADRVYATFKSNVKTGVNNDFNLLDQRIIWQNWYAFTSSMKQGNTLDVCKRLLFQKMKPEKNPFKGLSTDRKMDEVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18796 for 1564 contacts (12.0/contact) +
2D Compatibility (PS) -25213 + (NN) -2907 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: -16674.0 ( -10.66 by residue)
QMean score : 0.090
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