Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METIKQEVRESIVKGIIAGYKDY-------VNERNEVKKRMVISDAYAFTKSNHIESQVAKHLENFVKYIKEN---------AGPSWKYLKFIFN------------KDEEKNNI--MFILKNEDYF---DEKNVSVGKSLVADKNPKSKNYLEVLMAKNRDINFGTVGEDFEIGHQMTADSILFNIKEGSNRDINSYFLIITYRIDKESKQLAAIKQWLPNPETNSAIMVDDLTELIEKVIVEREDY----------HIDEEELEVLKNDGELELIDVEHAFGISIDEG----NDMIESER-------------------------- |
| 2JAK Chain:A ((30-372)) | IRDVPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNR-NVITEPIYPEVVHMFAVNMFRTLPPPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32277 for 1755 contacts (18.4/contact) +
2D Compatibility (PS) -26655 + (NN) -5820 + (LL) 204
1D Compatibility (HY) -13200 + (ID) 1600
Total energy: -14794.0 ( -8.43 by residue)
QMean score : 0.285
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