Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNIVQDPRVLKQIETIKGVTNDYKIVGMNNSQATNRRLENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHANDFDVLLMVYLSNYK-KANIVYDAHEIYAKNAFINK---VPL------IS-KFVESIEKHIVKHRVNAFVTVSHAAK------EYYQSKG--YK-KEANVITNAPILNDSREF-----------------K-EIENFKEIVYQGQIVMDRGYEEFIIASSAFKQ----NAPSFIIRGFGPH-----------EEVIK---ELIS--YNSENIRLDKPVEVKELVDKL----AESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLRDNHDLFNHLRQNAIK-ASKILNWQIESERLVELYKF |
| 2R60 Chain:A ((119-457)) | -------------------------------------------------------------------------------------KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMS-YADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALT------SFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120366 for 2061 contacts (-58.4/contact) +
2D Compatibility (PS) -29601 + (NN) -9389 + (LL) 6796
1D Compatibility (HY) -2800 + (ID) 1850
Total energy: -157210.0 ( -76.28 by residue)
QMean score : 0.371
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