Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCLNFREDNVMKKIMVIFGTRPEAIKMAPLVKEIDHNG-NFEANIVITAQHRDMLDSVLSIFDIQADHDLNIMQDQQTLADLTANALAKLDSIINEEQPDMILVHGDTTTTFVGSLAAFYHQIPVGHVEAGLRTHQKYSPFPEELNRVMVSNIAELNFAPTVIAAKNLLFENKDKERIFITGNT-VIDALSTTVQNDFVSTIINKHKGKKVILLTAHRRENIGEPMHQIFKAVRDLADEYKDVVFIYPMHRNPK-VRAIA-EKYLSGRNRIELIEPLDAIEFHNFTNQSYLVLTDSGGIQEEAPTFGKPVLVLRNHTERPEGVEAGTSRVIGTDYDNIVRNVKQLIEDDEAYQRMSQANN----PYGDGQASRRICEAIEYYFGLRSDKPDEFVPLRHK |
| 3OT5 Chain:A ((26-397)) | ---------AKIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITA-----LDQVLEIFDIKPDIDLDIMK-GQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHP-ILENLGDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELV-YPMHLNPAVREKAMAILGG-HERIHLIEPLDAIDFHNFLRKSYLVFTDSGGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGTNKENLIKEALDLLDNKESHDKMAQAANPYGDGFAANRILAAIKSHFEETDR--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182277 for 3105 contacts (-58.7/contact) +
2D Compatibility (PS) -38391 + (NN) -10970 + (LL) 1524
1D Compatibility (HY) -27200 + (ID) 8750
Total energy: -266064.0 ( -85.69 by residue)
QMean score : 0.475
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