Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MDKESVVASLARN-------KKIAVETMAGQRYIIERILHTNDEKHIHILKPKDVVLDVDSIKEIDENHLNDAT
1Z56 Chain:A ((159-235))
ADKLYKDICCVNDSYRNIKESDSSNRNRVEQLARERELLDKLLETRDE-RTRAMMVTLLNEKKKKIRELHEILRQNNI
General information:
TITO was launched using:
RESULT:
Template:
1Z56.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6508 for 261 contacts (24.9/contact) +
2D Compatibility (PS) -7009 + (NN) -888 + (LL) 64
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -3625.0 ( -13.89 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_1Z56.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z56-query.scw
PDB file :
Tito_Scwrl_1Z56.pdb
: