Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPS--VYSINMNMYTRLLLLDEN--------DHLTTKGSLSRDYAVNK-DNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKN-A-YQATFQRNPGFNETEKGSYGSPKIKNITLKFNGDPNNALSELRNHSIDMLAD-VNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIK-FYRGDKF--KI-ASPITPLVDTGN---EQRQDLEKVEKAINQ |
| 2GRV Chain:A ((25-414)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APTQIIMAI-DSIGPGFNPHLLSDQSPVNAAIASLVLPSSFRPVPDPTSPTGSRWELD--TTLLESAEVTQENPFTVTYKIRPEAQWT---------DNAPIAADDYWYLWRQMVSQPGVVD---PAGYDLITGVQSVE------------------------------------------GGK-QAVVTFSQPYPAWRELFN----DILPAHIVKDIPGG----FGA-------GLARAMPVTGGQFRVETIDPQRDEILLARNDRFWS------VPAKPDLVLFRRGGAPAALADSIRNGDTQVAQVHGGAATFAQLSAIPDVRTARIVTPRVMQLTLRAQQ-PKLADPQVRKAILGLIDVDLLASVGAGDDNTVTLAQAQVRSPSDPGYVPTAPPAMTRDDALELLRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48830 for 2210 contacts (-22.1/contact) +
2D Compatibility (PS) -33210 + (NN) -17095 + (LL) 14892
1D Compatibility (HY) -2400 + (ID) 2200
Total energy: -88843.0 ( -40.20 by residue)
QMean score : 0.372
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