Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFNQTNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGENLLKAIQDVTGLEEHDPVIQAWAKAYGVIADVFIQIEKEIYDQMM-----WIGFKPFKITNIKQESEDIKSFTVETEEYD-FSEFTPGQYITVDVSSDKLPYRAKRHYSIVSGEKNHLTF--GVKRD-VTTEHEGEVSTILHDEIKEGDMINLAAPVGGFVLE-NTTEPQLFLGSGIGVTPLVAMYEAA-SAKGLDTQMVQVAENEQHLPFKDNFNSIASHYDNAKLYTHL-----KDKQG----YIGTEEL----QAFLANKPEIYICGGTKFLQSMIEALKSLNYDMDRVHYETFIPRLSVAV |
3OZW Chain:B ((1-400)) | MLTQKTKDIVKATAPVLAEHGYDIIKCFYQRMFEAHPELKNVFNMAHQEQGQQQQALARAVYAYAENIEDPNSLMAVLKNIANKHASLGVKPEQYPIVGEHLLAAIKEVLGNAATDDIISAWAQAYGNLADVLMGMESELYERSAEQPGGWKGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSL-SDMPNGRSYRISVKREGGGPQPPGYVSNLLHDHVNVGDQVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQAPPRQVVFVHGARNSAVHAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKSILLPDADYYICGPIPFMRMQHDALKNLGIHEARIHYEVFGPDL---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -195753 for 2916 contacts (-67.1/contact) +
2D Compatibility (PS) -39651 + (NN) -5000 + (LL) 692
1D Compatibility (HY) -29200 + (ID) 7400
Total energy: -276312.0 ( -94.76 by residue)
QMean score : 0.468
|
|
|