Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFSDYQLILDELKMTLSHVEADEFSTFASKILHAEHIFVAGKGRSGFVANSFAMRLNQLGKQAHVVGESTTPAIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAGTNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVTEQTMQQNHANLE
1M3S Chain:A ((4-185))
---TEYVAEILNELHNSAAYISNEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRMPGSPKD--YKTIQPMGSLFEQTLLLFYDAVILKLMEKKGLDSETMFTHHANLE
General information:
TITO was launched using:
RESULT:
Template:
1M3S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107383 for 1406 contacts (-76.4/contact) +
2D Compatibility (PS) -19259 + (NN) -12437 + (LL) 444
1D Compatibility (HY) -11600 + (ID) 3700
Total energy: -153935.0 ( -109.48 by residue)
QMean score : 0.727
(partial model without unconserved sides chains):
PDB file :
Tito_1M3S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M3S-query.scw
PDB file :
Tito_Scwrl_1M3S.pdb
: