Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIISIMAVMLFLTGCGKSQEKATLEKDIDNLQKENKELKDKKEKLQQEKEKLADKQKDLEKEVKDLKPSKEDNKDDKKDEDKNKDKDKDKEASQDKQSKDQTKSSDKDNHKKPTSTDKDQKANDKHQS
2EQB Chain:B ((5-97))
--------------------------------------SNYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKEKYAIEILNKRLTEQLREKDT
General information:
TITO was launched using:
RESULT:
Template:
2EQB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 44482 for 375 contacts (118.6/contact) +
2D Compatibility (PS) -9963 + (NN) -1512 + (LL) 3316
1D Compatibility (HY) -1600 + (ID) 650
Total energy: 34073.0 ( 90.86 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_2EQB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQB-query.scw
PDB file :
Tito_Scwrl_2EQB.pdb
: