Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK
3QWD Chain:B ((3-194))--LIPTVIET----ERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGG-QGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPET-


General information:
TITO was launched using:
RESULT:

Template: 3QWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123122 for 1457 contacts (-84.5/contact) +
2D Compatibility (PS) -20472 + (NN) -9414 + (LL) 236
1D Compatibility (HY) -25600 + (ID) 9350
Total energy: -187722.0 ( -128.84 by residue)
QMean score : 0.572

(partial model without unconserved sides chains):
PDB file : Tito_3QWD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QWD-query.scw
PDB file : Tito_Scwrl_3QWD.pdb: