Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENANKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
4K5X Chain:A ((7-141))
-------------------------------------------------------------------------------------LHKEPATLIKAIDGDTMKLMYKGQPMTFRFLLVDTPETKHP---VEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWS--------
General information:
TITO was launched using:
RESULT:
Template:
4K5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45374 for 1059 contacts (-42.8/contact) +
2D Compatibility (PS) -14101 + (NN) -3875 + (LL) 5924
1D Compatibility (HY) -15600 + (ID) 6400
Total energy: -79426.0 ( -75.00 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_4K5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K5X-query.scw
PDB file :
Tito_Scwrl_4K5X.pdb
: