Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
3ZIT Chain:A ((4-76))
IEVYAQP-DCPPCVI------VKEFLKHN--------NVAYEEFDVKKDAA----ARNRLLYD--YDSYSTPTVVIDGEVVAGFQ--IEKLQQLLN------
General information:
TITO was launched using:
RESULT:
Template:
3ZIT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69314 for 519 contacts (-133.6/contact) +
2D Compatibility (PS) -7401 + (NN) 260 + (LL) 1968
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -80437.0 ( -154.98 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIT-query.scw
PDB file :
Tito_Scwrl_3ZIT.pdb
: