Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETN--QG---IYDFDILVVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFT-------------------------GVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTSVWAAGVRGSKLMEESFEG--VKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGES-TEEFEYVDRGTVCSLGS-HDGVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGGIGLAFKKGKF |
| 3H8L Chain:A ((2-357)) | -----TKVLVLGGRFGALTAAYTLKRLVG-SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESF------------QGGNIAI-GSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKK----GMLD-KVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEK--G-NTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMTV-------PKLGYLAVMTGRIAAQHLANRLGVPTKVDKYYP-TIVCVADNPYE-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214968 for 2630 contacts (-81.7/contact) +
2D Compatibility (PS) -34798 + (NN) -6961 + (LL) 4024
1D Compatibility (HY) -14800 + (ID) 3250
Total energy: -270753.0 ( -102.95 by residue)
QMean score : 0.523
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