Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVGKPTSYKTL-----PNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF----DSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYLVATDKSYIGDLVKIAGGENVIKVK--DRQYISSNTENLLNI-NPDIILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK |
| 1EFD Chain:N ((3-263)) | ------------------------------IDPNRIVALEWLPVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYG-PSPEMLARIA-PGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYEDFIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWGSTAVSIDRLAAYKDVDVLCFDHDNS------KDMDALMATPLWQAMPFVRAGRFQRVPAV-WFYGATLSAMHFVRVLDNAIG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85952 for 2018 contacts (-42.6/contact) +
2D Compatibility (PS) -26511 + (NN) -13911 + (LL) 3508
1D Compatibility (HY) -11200 + (ID) 2000
Total energy: -136066.0 ( -67.43 by residue)
QMean score : 0.467
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