Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVTPLAFQAISRNAVYTDTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDLVTSTLLATETPKFIAPAMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKGRMEEPLQIVSVIDAHFQNSNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALRNRGAIVTLVAGPTTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAAAVSDYTPVDVLEHKMKKQDGD-LSVSFKRTKDI---LKYLGEHKTSQYLIGFAAETEDIENYAQQKLRKKNADVIISNNVGDMSIGFSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILDELETRWQ |
1U7W Chain:B ((12-220)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEK-------ELTIKMVKNPDIVAGVAALKDHRP--YVVGFAAETNNVEEYARQKRIRKNLDLICAN--------------ALHLFWQDGDKV-LPLERKELLGQLLLDEIVTRY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U7W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84982 for 1445 contacts (-58.8/contact) +
2D Compatibility (PS) -20264 + (NN) -11452 + (LL) 14712
1D Compatibility (HY) -16000 + (ID) 3900
Total energy: -121886.0 ( -84.35 by residue)
QMean score : 0.556
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