Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLEK
4IHH Chain:I ((8-76))
----ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYIN----
General information:
TITO was launched using:
RESULT:
Template:
4IHH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39775 for 458 contacts (-86.8/contact) +
2D Compatibility (PS) -7580 + (NN) -2427 + (LL) 680
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -58502.0 ( -127.73 by residue)
QMean score : 0.900
(partial model without unconserved sides chains):
PDB file :
Tito_4IHH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IHH-query.scw
PDB file :
Tito_Scwrl_4IHH.pdb
: