Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKLNMNNEIKKVEQRLEKAIKSKDSV-LEQASLHLLSSGGKRVRPAFVILSSQF-GKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDN-------RV----------HQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINR-KTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT |
| 3KRP Chain:D ((8-271)) | -----MLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTA---MPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGM---------AEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGK-----------TYPKLIGVEKSKEFA---DRLNREAQEQ--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33629 for 1833 contacts (-18.3/contact) +
2D Compatibility (PS) -24683 + (NN) -13368 + (LL) 5640
1D Compatibility (HY) -18400 + (ID) 4300
Total energy: -88740.0 ( -48.41 by residue)
QMean score : 0.353
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