Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
4EEF Chain:G ((22-66))
--PWKFSENIAFEIALSFTNKDTPDR-----------WKKVAQYVKGRTPEEVKKHYE
General information:
TITO was launched using:
RESULT:
Template:
4EEF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 30953 for 250 contacts (123.8/contact) +
2D Compatibility (PS) -4424 + (NN) 771 + (LL) 1180
1D Compatibility (HY) -400 + (ID) 350
Total energy: 27730.0 ( 110.92 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_4EEF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EEF-query.scw
PDB file :
Tito_Scwrl_4EEF.pdb
: