Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------------------MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKENKEIELP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4IMP Chain:A ((31-550)) | SDPAAGWFWQAVARQDLKSVSDALDLDADAPLSATLPALSVWHRQERERVLADGWRYRVDWVRVAPQPVRRTRETWLLVVP-----PGGIEEALVERLTDALNTRGISTLRLDVPPAATSGELATELRAAADGDPVKAILSLTALD-ERPHPECKDVPSGIALLLNLVKALGEADLRIPLWTITRGAVKAGPADRLLRPMQAQAWGLGRVAALEHPERWGGLIDLPDSLDGDVLTRLGEALTNGLAEDQLAIRQSGVLARRLVPAPANQPAGRKWRPRGSALITGGLGAVGAQVARWLAEIGAERIVLTSRRGNQAAGAAELEAELRALGAQVSIVACDVTDRAEMSALLAEFDVTAVFHAAGVGRLLPLAETDQNGLAEICAAKVRGAQVLDELCDSTDLDAFVLFSSGAGVWGGGGQGAYGAANAFLDTLAEQRRARGLPATSISWGSWAGGGMADGAAGEHLRRRGIRPMPAASAILALQEVLDQDETCVSIADVDWDRFVPTFAATRATRLFDEVPAARKAM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IMP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1084 for 509 contacts (-2.1/contact) +
2D Compatibility (PS) -9567 + (NN) -1758 + (LL) 588
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -14421.0 ( -28.33 by residue)
QMean score : 0.370
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