Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDLNKKYLIDLHQHQNSSIEVLREFAEGN--EVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENV----NDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKGE
3R3H Chain:A ((8-220))
LTPELYKYLLDISLREHPALAALRKETSTMELANMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDT-----SGQTREIKKLNQVIKNDSRVFVSLLAIADGMFLVQPI-
General information:
TITO was launched using:
RESULT:
Template:
3R3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105170 for 1656 contacts (-63.5/contact) +
2D Compatibility (PS) -22471 + (NN) -7666 + (LL) 388
1D Compatibility (HY) -10800 + (ID) 2450
Total energy: -148169.0 ( -89.47 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_3R3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R3H-query.scw
PDB file :
Tito_Scwrl_3R3H.pdb
: