Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHVGGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRIKPVSEMMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPVLSILTSIGLDHTDILGGTYLDIARDKGAIIKP---NVPVIYAVKNEDALKYVRERAIEQHAKPIELDREIVVVSQ-NDEFTYRYKDYELET-IILSMLGEHQKQNAALAITALIELNEQGLIELDFNKMIDGIE-SVRWTGRIEQVH-DKPLIILDGAHNSESIDALIDTIKQYHDKEKVDILFSAI-NGKPINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIENDE--IQLVDDYVEFIKN----Y-QGDTLVITGSLYFISEVKSKLDFEAL |
| 3LK7 Chain:A ((111-437)) | -------------------------------------ESQLIGITGSNGKTTTTTMIAEVLNAGG-QRGLLAGNI-----------GFPASE---------------------------VVQ----------AAN-DKDTLVMELSSFQLM-GVKEFRPHIAVITNLMPTHLDYHG-SFEDYVAAKWNIQNQMSSSDFLVLNFNQGISKEL----AKTTKATIVPFSTTEKVDGAYVQDKQLFYKGENIMSVDDIGVPGSHNVENALATIAVAKLA------GISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDS-KSTNILATQKALSGF-DNTKVILIAGGLDRGNEFDELIPDITG-LKHMVVLGESASR------VKRAAQKAGVTYSDALDVRDAVHKAYEVAQQGDVILLSPANASWDMYKNFEVR--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -147440 for 2651 contacts (-55.6/contact) +
2D Compatibility (PS) -32655 + (NN) -2836 + (LL) 9804
1D Compatibility (HY) -5200 + (ID) 2350
Total energy: -180677.0 ( -68.15 by residue)
QMean score : 0.419
|
|
|