Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MQDNSTKYLLYIQTATSNHLETNCVFLHCDYILKVPINKLVSY-----YAKLHLSSQSVLI-------ETAKNILNINKLVPIYINPKTILFPLKHKRAPIQIYINAHYIV-----GMTAI-----ENSTLIHFQEGIQL------------------EVDEPFSLVSKKCHESLALKHFIENTISN
1ILE Chain:? ((198-386))
KEIQDPSVYVRFPLKEPKKLGLEKASLLIWTTTPWTLPGNVAAAVHPEYTYAAFQVGDEALILEEGLGRKLLGEGTQVLKTFPGKALEGLPYTPPYPQALEKGYFVVLADYVSQEDGTGIVHQAPAFGAEDLETARVYGLPLLKTVDEEGKLLVEPFKGLYFREANRAILRDLRGRGLLFKEESYLHSY
General information:
TITO was launched using:
RESULT:
Template:
1ILE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93300 for 1052 contacts (-88.7/contact) +
2D Compatibility (PS) -15750 + (NN) -1093 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -113443.0 ( -107.84 by residue)
QMean score : 0.166
(partial model without unconserved sides chains):
PDB file :
Tito_1ILE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ILE-query.scw
PDB file :
Tito_Scwrl_1ILE.pdb
: