Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGLFARASWGQDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVINPKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNG---QLNSQKCISFLTQTKGYMPDQYRYKIGNRLYGCD------TCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLRMSNKEFKQTYGHLAGAWRGKKPIQRNAILALAHFNEVDAIPELKKVATTDERPMIRATAYWAIGQILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE |
2ZVS Chain:A ((5-59)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKKCINCDMCEPECPNEAISMGDHIYEINSDKCT-----------------------ECVGHYETPTCQKVCPIPNTI-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21649 for 258 contacts (-83.9/contact) +
2D Compatibility (PS) -4900 + (NN) -3652 + (LL) 21680
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -13021.0 ( -50.47 by residue)
QMean score : 0.399
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