Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MSNAN-------NADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSGNEILELTYQLVILIQLFMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSFMLKGIGDIINTSLVVIIACLIYMVLQNKLGSF---ELIILPVLVPIVSGGIGLITLPY--IRKITQAIGNVIHSFTDLNPLLMSILISVAFSLLMVTPISLVAIAT-----AISLNGLGSGAANLGIVAACVTFLFG--SLRVNSIGVNAVLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAYVLQVKGTPLSAGFGYTGLVGPINAFNRMSGDPTMNIILLALGYFVIPFVSAFIVHELCKKFIPIYS----NDIYKFEVPKQ-- |
| 4OV4 Chain:A ((23-408)) | PKTIHIQDVTLRDGNQALKRPWTIDEKIEVFDLLVELNVDGIEVGFPSSNETE-FHTCQVLSKRAPKGKPIAALSRANQNEIAVTWEAIQ-KADCPRMHIVYPVSDFSIKHVLKISEKEVLQKIRNSISFARSIVGPGIEIQFSGEHFGDAIENFAFTKEAFLTAIEAGANIINLPNTVERYRPMVFVNMVKEIKDVVKDKAIISIHTHNDLGMATATSVESVYVGAEQIEVALNGLGERAGNTNLYETAIALHQNGENLNINFQRIYPTAKRISELTGIPIGEKTPIIGED--IFSHRSGIHQHQSKGAYRTFSPEFVGRMDKETIS-FTNQSGHKAIEFLLHQRG----IQVSKEGIHHLFSLAKSISSRENNREITEAELVALSQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4OV4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -331970 for 2724 contacts (-121.9/contact) +
2D Compatibility (PS) -35264 + (NN) 4043 + (LL) 1316
1D Compatibility (HY) 4400 + (ID) 3200
Total energy: -360675.0 ( -132.41 by residue)
QMean score : 0.169
|
|
|