Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKRARIIYNPTSGKELFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAAGGQLTQVSYETPSKLKSIVGPFAYYIKGFEMLPQMKAVDLRIEYDGNVFQG-EALLFFLGLTN-------SMAGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFTDLQLNVDGEYGGK--LPANFLNLERHIDVFAPNDIVNEELINNDHVDDNLIEE |
| 1Z0S Chain:A ((30-266)) | --MRAAVVYKTDG-------HVKRIEEALKRLEVEVELFNQP---------S-EELENFDFIVSVGGDGTILRILQKLK---RCPPIFGINTGRVGLLT-HAS-PENFEVELKKAVE-KFE------VE-RFPRVSCSAMPDVLALNEIAV-LSRK---------------PAKMIDVALRVDGVEVDRIRCDGFIVATQIGSTGYAFSAGGP-V----VEPYLECFILIPIAPFRFG----------------WKPYVVSMERKIEVIA-EKAIVVADGQKSVDFDGEITIEKSEFPAVFFKNEKR------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94586 for 1822 contacts (-51.9/contact) +
2D Compatibility (PS) -23671 + (NN) -689 + (LL) 5396
1D Compatibility (HY) -6000 + (ID) 1900
Total energy: -121450.0 ( -66.66 by residue)
QMean score : 0.245
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