Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIATDKNVQGDNYRTLLPFKESQARGLLQDNMANSYNGGDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNPKYTKR-EIDKMSEKDKKDKKANENLG----------------LNPSHEGETNPEKIAEKSPAYLSNILEQDFYGGGDTKGKNIKGMTIGLAMNSVYYYKKEKDGPTFS------------------KKLDDSEVKKQGKQMASEILSRLREN--------DDLKDIP----IHFAIYKQSSEDSITPGEFITQATAEKSQTKLNE---WHNINEKSALLPSSTAADYDENLNNNFKQFNDNLQSYFSNFTQAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYE----IRIK---DGN--QPRALISKTKDDKEPQVHIYSN |
| 4OV8 Chain:A ((6-472)) | DTLNDVIQDPTRRNKLINDNNLLKGIIMGRDGPVPSSRELIV-----RPDTLRAIINNRATIETTTMEAEFTETLMESNYNSASVKVSAPCITANSEYSESSSFKNTETEKSMYTSSRYLFPQGRIDFTTPDSGDVIKLSPQFTSGVQAALAKATGTEKREALQNLFQEYGCVFRTKVHIGGVLSAHTMETFSRSENETEVKQDVKAGLEGAVKG--WGGGATAGHGNTQGTITTSQNRKLNVKYIVNGGDYTKIQNTEEWVASTNQSEHWRVIEVTEVTAVADLLPQPIRGQVKDLLKPLLGKWVDVEKVPGLESLPVSVYRP--KGAIPAGWFWLGDTADASKALLVKPTLPARSGRNPALTSLHQGSGMTEQPFVDLPQYQY-LSTYFGSFAHDTPPGSTL--RGLRPDHVLPGRYEMHGDTISTAVYVTRPVDVPFPEDEAFDLKSLVRVKLPGSGNPPKPRSAL------KKSMVLFD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 136209 for 2592 contacts (52.5/contact) +
2D Compatibility (PS) -38161 + (NN) 9735 + (LL) -108
1D Compatibility (HY) -7200 + (ID) 3350
Total energy: 97125.0 ( 37.47 by residue)
QMean score : 0.129
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