Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDSNQGLQANPQYTIHYLSQEITRLTQENAMLKAYIQEQNEKSKSAEEE
1HN3 Chain:A ((1-40))
------GSHMGRRFLVTVRIQRAGRPLQERVFLVKFVRSRRPRTAS----
General information:
TITO was launched using:
RESULT:
Template:
1HN3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2345 for 142 contacts (16.5/contact) +
2D Compatibility (PS) -4155 + (NN) -67 + (LL) 520
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -2907.0 ( -20.47 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_1HN3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HN3-query.scw
PDB file :
Tito_Scwrl_1HN3.pdb
: