Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTP-EVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE
1P3H Chain:J ((5-97))
-IKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV-
General information:
TITO was launched using:
RESULT:
Template:
1P3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2742 for 575 contacts (-4.8/contact) +
2D Compatibility (PS) -9884 + (NN) -971 + (LL) 312
1D Compatibility (HY) -9200 + (ID) 2150
Total energy: -24635.0 ( -42.84 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_1P3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P3H-query.scw
PDB file :
Tito_Scwrl_1P3H.pdb
: