Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MKTFKAVRFQIV-NEHGRIIEYELEDGVIINKEESGTGWLLEIVISNEHYETFKEYQDN---EQLL-DIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECHIYTLRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE
4KWY Chain:A ((4-140))
AGVESGLSSIETVAAEGRGGYLLREQLDDALAHRQGSPAA-YKLYLSVNEQRFARGVRLDNVANRFELRMSVDWRLLDAKNGAEVHKGRTDVSVTYDSADQ--------PYAAIAAQQDGQERAAAEAA-RKIQLDLATWLAGKKPA-------
General information:
TITO was launched using:
RESULT:
Template:
4KWY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51926 for 899 contacts (-57.8/contact) +
2D Compatibility (PS) -14503 + (NN) -7894 + (LL) 1224
1D Compatibility (HY) 0 + (ID) 400
Total energy: -73499.0 ( -81.76 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_4KWY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KWY-query.scw
PDB file :
Tito_Scwrl_4KWY.pdb
: