Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMEVCPYLEETFKILGRSWNGLIINYLSRCNDC-SAHFSDMKRDLKTITPRALSLKLSELAQWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYVDLTDQRTAK
3DF8 Chain:A ((13-108))
--CIDPS-ESVLHLLGKKYTMLIISVLGNG--STRQNFNDIRSSIPGISSTILSRRIKDLIDSGLVERRSGQ----ITTYALTEKGMNVRNSLMPLLQYISVLDR--------
General information:
TITO was launched using:
RESULT:
Template:
3DF8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45897 for 609 contacts (-75.4/contact) +
2D Compatibility (PS) -10313 + (NN) -3536 + (LL) 1144
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -65452.0 ( -107.47 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_3DF8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DF8-query.scw
PDB file :
Tito_Scwrl_3DF8.pdb
: