Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKIENEIVNKTYLAINSLEELRNMIGIKSDYFYKCLYVNDHFYNVIKIPKRKKDEYRELMIPNMALKNIQRWILDNVLYRRQ----VHKCATGFVPRKSIVNNAIPHVGQKYILKMDIENFFPSITFKQVRKI---FSEMGY-KFELATALANL------------CTVNNQLPQGAPTSPYIANIIFYNIDK-RIFSYCQK----------NNLRYTRYADDITISGSNKVSFSKEIIREIVNQYNFRINESKTIMFKPGDRKKVTGIIVNEKISVPKTLIREVRKQIYFVNKFGLEEHLIRNNYSLDYEQQFIMSIYGKISFIKMIDFKKGVSLQKKFNEVLGNIESSNMYRDNIDFDDIELHWIN |
| 2CKW Chain:A ((179-400)) | -----------------------------------------------------G-KRRLLWGCDAATTLIATAAFKAVATRLQVVTPMTPVAVGINMDSVQMQVMNDSLKGGVLYCLDYSKWDSTQNPAVTAASLAILERFAEPHPIVSCAIEALSSPAEGYVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTYGDDCMYSVCPATASIFHTVLANLTSYGLKP--------KPTNTPVFLKRTFTQT---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72461 for 1328 contacts (-54.6/contact) +
2D Compatibility (PS) -19638 + (NN) -6364 + (LL) 12104
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -92009.0 ( -69.28 by residue)
QMean score : 0.257
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