Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFYEFMQSFLGDDTPLGELVDWINQDSNFPREVKSHSEILSYFRTNPCPESISVPVIKRALSVFNQFTNVQ
1IXS Chain:A ((13-62))
------------ESEAAEEAVMALAALGF--KEAQARAVVLDLLAQNP--KARAQDLIKEALKRLR------
General information:
TITO was launched using:
RESULT:
Template:
1IXS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11659 for 351 contacts (-33.2/contact) +
2D Compatibility (PS) -5215 + (NN) -1313 + (LL) 1520
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -18367.0 ( -52.33 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_1IXS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IXS-query.scw
PDB file :
Tito_Scwrl_1IXS.pdb
: