Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQYDDSKVAVSQMKDAIEDQGYDVV
4A4J Chain:A ((6-64))
-----LQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTPQILTDAVERAGY---
General information:
TITO was launched using:
RESULT:
Template:
4A4J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41882 for 398 contacts (-105.2/contact) +
2D Compatibility (PS) -6202 + (NN) -527 + (LL) 840
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -54071.0 ( -135.86 by residue)
QMean score : 0.685
(partial model without unconserved sides chains):
PDB file :
Tito_4A4J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A4J-query.scw
PDB file :
Tito_Scwrl_4A4J.pdb
: