Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSA-QSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIKGDKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW |
1YXB Chain:A ((4-91)) | --------------------------------------------------------------------------------------------------------KTFEELFTELQHKAAN----TSRTAELVDKGVHAIGKKVVEEAAEVWMAAEYEGKDAAAEEISQLLYHVQVMMVARGISLDDVYAHLL------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YXB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12526 for 455 contacts (-27.5/contact) +
2D Compatibility (PS) -7901 + (NN) 4408 + (LL) 7000
1D Compatibility (HY) 0 + (ID) 950
Total energy: -9969.0 ( -21.91 by residue)
QMean score : 0.345
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