Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRALETIATLREYRKSLKES------VGFVPTMGALHRGHQSLIERSLKENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKACEKLKK-----LGLEILKNLEVDYLECCNHKLEPLKTIEPANTLVLVAARVGKTRLLDNLWV |
3INN Chain:C ((21-298)) | --SMQIIHTIEELRQALAPARQQGKKIGFVPTMGYLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDAQVDYLFAPTVSDMYPRPMQTVVDVPP---LGNQIEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRIVGVETVREDDGLACSSRNVYLTPEQRRAAIIVPQALDEADRLYRSGMDDPDALEAAIRTFIGRQPLAVPEVIAIRDP-ETLERLPALQGRPILVALFVRVGATRLLDNRVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3INN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134602 for 2165 contacts (-62.2/contact) +
2D Compatibility (PS) -28874 + (NN) -10763 + (LL) 364
1D Compatibility (HY) -23600 + (ID) 5650
Total energy: -203125.0 ( -93.82 by residue)
QMean score : 0.460
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