Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILKSSIDRLLQTIDIVEVISSYVDLRKSGSNYMACCPFHEERSASFSVNQVKGFYYCFGCGASGDSIKFVMAFEKLSFVEALEKLAHRFNIALEYDKGVYYDHKEDYHLLEMVSSLYQEELFN--APFFLNYLQKRGLSMESIKAFKLGLCTNKID---YGIENKGLNKDKLIELGVLGKSDKEDKTYLRFLDRIMFPIYSPSAQVVGFGGRTLKEKAAKYINSPQNKLFDKSSLLYGYHLAKEHIYKQKQVIVTEGYLDVILLHQAGFKNAIATLGTALTPSHLPLLKKGDPEILLSYDGDKAGRNAAYKASLMLAK---EQRKGGVILFENNLDPADMIANHQIETLKNWLSRPIAFIEFVLRHMAGSYLLDDPLEKDKALKEMLGFLKNF-SLLLQNEYKPLIATLLQAPLHVLGIREPVSFQPFYPKTEKPNRPQKFAHVSSMPSLEFLEKLVIRYLLEDRSLLDLAVGYIHSGVFLHKKQEFDALCQEKLDDPKLVALLLDANLPLKKGGFEKELRLLILRYFERQLKEIPKSPLSFSEKMIFLKRARQAIMKLKQGELVAI |
| 1DD9 Chain:A ((20-330)) | ---------------------------------------------------------------------------------------------------------TLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTN----RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLG-STTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQLE---------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164967 for 2317 contacts (-71.2/contact) +
2D Compatibility (PS) -31865 + (NN) -14441 + (LL) 19628
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -213545.0 ( -92.16 by residue)
QMean score : 0.481
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