Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYSAIPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRE---SHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKE--HGLEGVSGLHFHTHCEQNADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSD----YDVNL---LIQTIKDFKER-YH-NTEVILEPGEAIGWQCGFLIASVIDIVQ-NDQEIAILDASFSAHMPDCLEMPYRPS-ILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGS--------FSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKIDSQGFKILKS-FSYEDYKNRN |
| 1KNW Chain:A ((21-416)) | ---PAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAA--GYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS------------PGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRS---------LEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALP-EVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -174522 for 3151 contacts (-55.4/contact) +
2D Compatibility (PS) -39561 + (NN) -11809 + (LL) 2256
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -238886.0 ( -75.81 by residue)
QMean score : 0.397
|
|
|