Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAIKILLIMTLSLNAISVNRALFDLKDSQLKGELTPKIVDFGGYKSNTTEWGATALNYINAANGDAKKFSALVEKMRFNSGILGNFRAHAHLRQALKLQKNLKYCLKIIARDSFYSYRTGIYIPLGISLKDQKTAQKMLADLSVVGAYLKKQQENEKAQSPYYRSNNYYNSYYSPYYGMYGMYGMGMYGMYGMGMYDFYDFYDGMYGFYPNMFFMMQVQDYLMLENYMYALDQEEILDHDASINQLDTPTDDDRDDKDDKSSQPANLMSFYRDPKFSKDIQTNRLNSALVNLDNSHMLKDNSLFHTKAMPTKSVDAITSQAKELNHLVGQIKEMKQDGASPNKIDSVVNKAMEVRDKLDNNLNQLDNDLKDQKGLSSEQQAQVDKALDSVQQLSHSSDVVGNYLDGSLKIDGDDRDDLNDAINNPMQQPAQQTPINNMDNTHANDSKDQGGNALINPNNATNDDHNDDHMDTNTTDTSNANDTPTDDKDASGNNTGDMNNTDTGNTDTGNTDTGNTDDMSNMNNGNDDTGNTNDDMGNSNDMGDDMNNANDMNDDMGNSNDDMGDMGDMNDDMGGDMGDMGDMGGDMGN |
2AKF Chain:A ((1-32)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSRLEEDVRNLNAIVQKLQERLDRLEETVQAK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5362 for 122 contacts (44.0/contact) +
2D Compatibility (PS) -3402 + (NN) -23 + (LL) 19384
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 19421.0 ( 159.19 by residue)
QMean score : 0.576
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