Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSTRIGSKIVMMVCAVVIVISAVMGVIISYKVESVLQSQATELLQKKAQLVSFKIQGIMKRIFMGANTLERFLSDENGAIN------DTLKRRMLSEFLLANPHVLLVSAIYTNNNERMITAMNMDSKIAYPNTALNENMTNQIHSLKSITRSDPYYKEVNGDKIYGMDITLPLMGKNQNVIGALNFFLNIDAFYTDVVGKKKSNTFLMGKDGRILINPNREIQDKILSAINPDKRVAKAV--EYYNQ---N--------EAGTLSYHSLSG-----NTETFLAIQPFDFFEEKGNNGNHWRWAIGKYVNKSLVFKEATNTKFIIITTLILGVLVLAFLVFIIISNLITKRISRVNNTLNDFFNLLNNPKNNHAISLTPPSAYDEIGQMQASINENILKTQESIQADNKAIQNSIEVTNYVENGDFTQEIACVPKNKDLQALRNTINSIIQYFRNQIGADIESLNNALEHYKNLDFTHHIQNPKANMEKALNTLGQEISSMLKASLGFANALNHESKDLKTCVDNLTKTAHKQERSLKNTTQSLEEITNIITMIDSKSQEMISQGEDIKSVVDMIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSIADNAESIKMQNKGVENIHNSINALQQDVQDNLTIANHSLQVSTKIDGISQDILEDVSKKKF |
| 3BY9 Chain:A ((7-259)) | ---------------------------------------ALLNEHQSQLDRFSSHIVATLDKYAHIPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVI-QA-ADTYLIDRFGNTIASSNWNLDRSFIGRNFAWRPYFYLSIAGQKSQY--FALGSTS--GQRGYYYAYPVIY-AAEILGVIVVKMDLSAIEQGWQNK-SSYFVATDDHQVVFMSSQPAWLFHSVADLSPA-QLNDIRQSQQYLDSPIPSLGWQGDLQAEQSEWR--KPEKHWLQDDYIVSSRPLP----------ELALTIRVLSPKI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102264 for 1792 contacts (-57.1/contact) +
2D Compatibility (PS) -24043 + (NN) -5949 + (LL) 32968
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -103738.0 ( -57.89 by residue)
QMean score : 0.359
|
|
|